Publishing to WordPress with RStudio

Note: I have no idea what I'm talking about, but it's working, so here we go!

This is an R Markdown document I created using RStudio, an open source IDE for working with R.

One of our clients uses R Markdown as part of their workflow for creating and publishing rich reports with charts and data in HTML. For a while they've been working with the ever so available tools: copy and paste. This seems to work well for the most part, but the images generated as part of the document are included inline and the WordPress editor removes some of that image data during the process of saving after pasting. (I'm pretty sure this is something that used to work, but I haven't gone back and verified yet.)

Our client found a great blog post explaining how to post from R Markdown to WordPress and asked us if that was an option with their site. While I generally have a knee-jerk reaction to publishing with XML-RPC, I don't really have a reason why it shouldn't work. So I checked it out!

Here's the quick version:

  1. Download and install the R binary from one of the many CRAN mirrors.
  2. Download and install RStudio.
  3. Open RStudio.
  4. Create a new R Markdown file.

From what I can tell, there are three important panes in the RStudio window.

  • The file pane used to edit the R Markdown document.
  • The Console pane used to issue commands in R syntax to manipulate the document and its configuration.
  • The Help/Viewer pane on the right displays help information or a preview of the document upon request.

The file pane has an “Knit” menu that provides options for publishing the document to HTML, PDF, or a Word document. Additional configuration is required to “knit” to WordPress.

In the console, I typed these commands:

install.packages( "knitr" )
install.packages( "devtools" )

This installs the packages required to publish over XML-RPC with commands that WordPress understands.

Once those are setup, an XML-RPC configuration needs to be set. Note the lowercase P in each command.

options(WordpressURL = c(""))
options(WordpressLogin = c( "username" = "password" ))

One minor word of caution: when I find myself publishing via XML-RPC or anything else that requires a plaintext username and password, I add separate user account to my site with a lower set of capabilities and then manually adjust the author information once the post is properly published.

Now we're ready to publish. The RWordPress package provides the knit2wp command. If you type ?knit2wp in the console pane, information appears in the help pane explaining how to manipulate the command to create a new post, edit a post, and assign categories and tags.

To publish this post as a draft on my site, I used:

knit2wp('testpost.Rmd', title='Publishing to WordPress with RStudio', publish = FALSE )

After I published the first version and made some changes, I used the following to edit the post:

knit2wp('testpost.Rmd', title='Publishing to WordPress with RStudio', action=c("editPost"), postid = 13616, publish = FALSE )

And here we are. This is pretty cool!

Why R Markdown?

I'm done with the overview, but I'm including this section as an example. The framework for it was provided by RStudio when I first created the document.

From what I can tell, the cars variable is already provided as a dataset. When I type cars in the console pane, I get a list of numbers populating speed and distance columns. If I type summary(cars) in the console, I see the a version of the table listed below, which this markdown document says to embed:

##      speed           dist       
##  Min.   : 4.0   Min.   :  2.00  
##  1st Qu.:12.0   1st Qu.: 26.00  
##  Median :15.0   Median : 36.00  
##  Mean   :15.4   Mean   : 42.98  
##  3rd Qu.:19.0   3rd Qu.: 56.00  
##  Max.   :25.0   Max.   :120.00

And I can plot that same data into a graph with plot(cars):

plot of chunk Cars plotted

How cool!

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